Samuela Pasquali
aka Miss/Madame/Signora Nitti
Curriculum (pdf)
(Oct 2007)
Research interests
(pdf) (Oct 2007)
Talks
"On-lattice thermal Casimir: numerical methods and theory"
(October 2006)
Ph.D. defence talk: "Studies on confined polymers"
(May 2005)
"Exploring RNA secondary structure repertoire
through graphs" (Jan 2005)
Write-ups
Mathematical models of Hepatitis C infection (2003)
RNA secondary structure tutorial (2002)
Ph.D. thesis (2005)
Papers
R.A. Broglia, G. Tiana, S. Pasquali, H. E. Roman, E. Vigezzi,
"Folding and
Aggregation of Designed Protein Chains" , Proc. Natl. Acad. Sci. USA,
95:12930-1293 (1998)
H. H. Gan, R. A. Perow, S. Roy, J. Ko, M. Wu, J. Huang, S. Yan, A. Nicoletta,
J. Vafai, D. Sun, L. Wang, J. E. Noah, S. Pasquali, and T. Schlick,
"Analysis of Protein Sequence/Structure Similarity Relationships",
Biophys. J., 83:2781-2791 (2002)
H. H. Gan, S. Pasquali, and T. Schlick,
"Exploring The Repertoire of RNA
Secondary Motifs Using Graph Theory with Implications for RNA Design" ,
Nuc. Acids Res., 31:2926-2943 (2003)
S. Pasquali, H.H. Gan, T. Schlick,
"Modular RNA
architecture revealed by computational analysis of existing pseudoknots and
ribosomal RNAs" , Nuc. Acids Res., 33:1384-1398 (2005)
S. Pasquali, J.K. Percus
"Mapping a Homopolymer onto a Model Fluid" ,
JCP 125:064906 (2006)
S. Pasquali, F. Nitti, A.C. Maggs
"Numerical methods for fluctuation driven
interactions between dielectrics" ,
Phys. Rev. E 77, 016705 (2008)
S. Pasquali, A.C. Maggs
"Fluctuation-induced interactions between
dielectrics"
,
Sept 2007,
arXiv:0704.2171, JCP accepted for publication
S. Pasquali, A.C. Maggs
"Numerical studies of Casimir forces"
,
Jan 2008,
arXiv:0801.4385,
submitted
S. Pasquali, J.K.Percus
"Mean Field and the Single Homopolymer"
,
June 2008,
arXiv:0806.4051,
submitted